Genbank: Libary for processing the NCBI genbank format
Haskell cabal Genbank libary contains tools, parser and datastructures for the NCBI (National Center for Biotechnology Information) Genbank format.
For more information on genbank refer to: http://www.ncbi.nlm.nih.gov/genbank/
For a sample genbank record see: http://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html
Bio.GenbankData - Datastructures for Genbank format
Contains Haskell datastructures for Genbank format and for contained features, subfeatures
Bio.GenbankParser - Parse Genbank format
Contains Haskell functions to parse Genbank format from files or internal Strings.
Bio.GenbankTools - Tools for processing Genbank
Contains Haskell functions to extract nucleotide sequences for features
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Downloads
- Genbank-1.0.1.tar.gz [browse] (Cabal source package)
- Package description (revised from the package)
Note: This package has metadata revisions in the cabal description newer than included in the tarball. To unpack the package including the revisions, use 'cabal get'.
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| Versions [RSS] | 1.0.0, 1.0.1, 1.0.2, 1.0.3 |
|---|---|
| Dependencies | base (>=4.5 && <5), biocore, biofasta, bytestring, parsec, split [details] |
| License | LicenseRef-GPL |
| Author | Florian Eggenhofer |
| Maintainer | florian.eggenhofer@univie.ac.at |
| Revised | Revision 1 made by FlorianEggenhofer at 2014-09-08T20:42:55Z |
| Category | Bioinformatics |
| Source repo | head: git clone https://github.com/eggzilla/Genbank this: git clone https://github.com/eggzilla/Genbank/tree/1.0.1(tag v1.0.1) |
| Uploaded | by FlorianEggenhofer at 2014-09-08T20:41:53Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Downloads | 4416 total (4 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs uploaded by user Build status unknown [no reports yet] |