BiobaseInfernal: Infernal data structures and tools
Provides import and export facilities for Infernal/Rfam data formats. We include Stockholm, CM, verbose Infernal results, and tabulated Infernal results. Some small tools are included.
With the BioHaskell library split, this package is officially back! And the package is not feature-complete yet, take the above as a will-include-soon list.
The taxonomy importer makes use of Iteratee.zip, hence the switch from Enumerator. (See the Biohaskell wiki pages for discussion on Iteratee/Enumerator).
Downloads
- BiobaseInfernal-0.5.3.0.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
Maintainer's Corner
For package maintainers and hackage trustees
Candidates
| Versions [RSS] | 0.0.2.0, 0.0.2.1, 0.5.0.0, 0.5.1.0, 0.5.2.0, 0.5.3.0, 0.5.3.1, 0.5.4.0, 0.5.4.1, 0.6.0.0, 0.6.0.1, 0.6.2.0, 0.7.0.0, 0.7.0.1, 0.7.1.0, 0.8.1.0 |
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| Dependencies | attoparsec, attoparsec-iteratee, base (>3 && <5), bytestring, containers, either-unwrap, iteratee, transformers, tuple [details] |
| License | GPL-3.0-only |
| Copyright | Christian Hoener zu Siederdissen, 2011 |
| Author | Christian Hoener zu Siederdissen |
| Maintainer | choener@tbi.univie.ac.at |
| Category | Bioinformatics |
| Home page | http://www.tbi.univie.ac.at/~choener/ |
| Uploaded | by ChristianHoener at 2011-08-03T23:59:22Z |
| Distributions | |
| Reverse Dependencies | 3 direct, 0 indirect [details] |
| Downloads | 16145 total (29 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
| Your Rating | |
| Status | Docs uploaded by user Build status unknown [no reports yet] |