BiobaseFR3D: Importer for FR3D resources
Provides importers for FR3D resource files. Of particular interest are basepairs files which describe canonical and non-canonical (non-Watson-Crick) base pairings in RNA secondary structure.
The original FR3D paper is:
FR3D: Finding Local and Composite Recurrent Structural Motifs in RNA 3D Structures, Michael Sarver; Craig L. Zirbel; Jesse Stombaugh; Ali Mokdad; Neocles B. Leontis. /Journal of Mathematical Biology/ (2008) 56:215–252.
Downloads
- BiobaseFR3D-0.1.1.0.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
Maintainer's Corner
For package maintainers and hackage trustees
Candidates
- No Candidates
| Versions [RSS] | 0.1.0.1, 0.1.1.0, 0.1.3.0, 0.2.2.0, 0.2.3.0 |
|---|---|
| Dependencies | base (>3 && <5), bytestring, filemanip, iteratee [details] |
| License | GPL-3.0-only |
| Copyright | Christian Hoener zu Siederdissen, 2011 |
| Author | Christian Hoener zu Siederdissen |
| Maintainer | choener@tbi.univie.ac.at |
| Category | Bioinformatics |
| Home page | http://www.tbi.univie.ac.at/~choener/ |
| Uploaded | by ChristianHoener at 2011-09-28T14:08:25Z |
| Distributions | |
| Reverse Dependencies | 2 direct, 1 indirect [details] |
| Downloads | 5162 total (7 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
| Your Rating | |
| Status | Docs uploaded by user Build status unknown [no reports yet] |